STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL39022.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
KJL39023.1
Single-stranded DNA-binding protein.
 
     0.949
KJL36414.1
Single-stranded DNA-binding protein.
 
     0.786
KJL39029.1
Hypothetical protein.
 
     0.785
KJL36416.1
Hypothetical protein.
 
     0.784
KJL36415.1
Type IV secretory system Conjugative DNA transfer.
 
     0.783
KJL39028.1
Type IV secretory system Conjugative DNA transfer.
 
     0.781
KJL39039.1
Hypothetical protein.
 
     0.775
KJL36422.1
Hypothetical protein.
 
     0.772
KJL36418.1
AAA-like domain protein.
 
     0.769
KJL36429.1
Hypothetical protein.
  
     0.769
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.