STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL38317.1Hypothetical protein; Bacterial transglutaminase-like N-terminal region. (1086 aa)    
Predicted Functional Partners:
KJL38318.1
Hypothetical protein.
 
  
 0.977
KJL38320.1
Hypothetical protein.
 
     0.873
KJL38319.1
Hypothetical protein; Bacterial transglutaminase-like N-terminal region.
 
    
0.867
KJL34822.1
Hypothetical protein.
 
     0.790
KJL35093.1
Hypothetical protein.
 
     0.790
KJL39301.1
Hypothetical protein.
 
    0.748
KJL39302.1
Hypothetical protein.
 
    0.633
KJL39303.1
Transglutaminase-like superfamily protein.
 
     0.584
KJL38316.1
Hypothetical protein.
       0.561
KJL36791.1
Hypothetical protein.
      
 0.503
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.