STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL37344.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
pcoC
Copper resistance protein C precursor.
       0.773
czcO_4
Putative oxidoreductase CzcO.
       0.752
bdbD
Disulfide bond formation protein D precursor.
       0.752
mepM_5
Murein DD-endopeptidase MepM.
 
     0.622
KJL37338.1
Cytochrome c oxidase caa3 assembly factor (Caa3-CtaG).
       0.562
lnt_2
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
       0.561
ccs1
Cytochrome c biogenesis protein Ccs1.
       0.561
KJL37340.1
Cytochrome C biogenesis protein transmembrane region.
       0.561
resA_2
Thiol-disulfide oxidoreductase ResA.
       0.561
KJL37342.1
Hypothetical protein.
       0.561
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.