STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbpC2Fe(3+) ions import ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily. (347 aa)    
Predicted Functional Partners:
cysW_1
Sulfate transport system permease protein CysW.
 
 0.992
fbpA
Fe(3+)-binding periplasmic protein precursor.
 
 0.981
potB
Spermidine/putrescine transport system permease protein PotB.
 0.933
potD
Spermidine/putrescine-binding periplasmic protein precursor.
 
 
 0.906
ydcV
Inner membrane ABC transporter permease protein YdcV.
 
 
 0.893
KJL36137.1
Thiamine transporter membrane protein.
  
 
 0.843
cysW_2
Sulfate transport system permease protein CysW; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  0.832
KJL36139.1
Bacterial extracellular solute-binding protein.
  
 
 0.762
potA_1
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
  
  
 
0.739
KJL36138.1
Spermidine/putrescine ABC transporter membrane protein.
  
 
  0.737
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.