STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alsBD-allose-binding periplasmic protein precursor. (344 aa)    
Predicted Functional Partners:
rbsC
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 0.987
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.973
rbsA_1
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.961
lsrC
Autoinducer 2 import system permease protein LsrC; Belongs to the binding-protein-dependent transport system permease family.
 0.957
lsrD_2
Autoinducer 2 import system permease protein LsrD; Belongs to the binding-protein-dependent transport system permease family.
 0.945
lsrD_1
Autoinducer 2 import system permease protein LsrD; Belongs to the binding-protein-dependent transport system permease family.
  
  0.922
mglA_2
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.907
mglA_3
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.874
xylH_1
Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
  
  0.854
xylH_2
Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
  
  0.853
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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