STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpASn-glycerol-3-phosphate transport system permease protein UgpA. (280 aa)    
Predicted Functional Partners:
araQ_4
L-arabinose transport system permease protein AraQ.
 
  0.985
msmE_4
Multiple sugar-binding protein precursor.
 
  0.967
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
  0.947
araQ_1
L-arabinose transport system permease protein AraQ.
 
  0.936
araQ_2
L-arabinose transport system permease protein AraQ.
 
  0.935
sugB
Trehalose transport system permease protein SugB.
  
  0.929
malE
Maltose-binding periplasmic protein precursor.
 
 0.926
ugpC
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
  0.915
lacG
Lactose transport system permease protein LacG.
 
  0.906
araQ_3
L-arabinose transport system permease protein AraQ.
 
  0.905
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.