STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL36229.1Bacterial extracellular solute-binding protein. (379 aa)    
Predicted Functional Partners:
bbsE
Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsE; Belongs to the CoA-transferase III family.
 
     0.937
KJL36227.1
Fumarylacetoacetate (FAA) hydrolase family protein.
 
     0.924
ydgJ
Putative oxidoreductase YdgJ.
 
     0.901
rhmD
L-rhamnonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.870
KJL36232.1
Metallo-beta-lactamase superfamily protein.
 
    0.869
KJL36235.1
Amidohydrolase.
 
     0.830
aldH
NADP-dependent fatty aldehyde dehydrogenase.
 
     0.828
lutR_3
HTH-type transcriptional regulator LutR.
 
    0.826
echA8_4
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
 
    0.815
ugpA
Sn-glycerol-3-phosphate transport system permease protein UgpA.
  
  0.771
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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