STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL35955.1Cytochrome c oxidase caa3 assembly factor (Caa3-CtaG). (277 aa)    
Predicted Functional Partners:
KJL36795.1
Hypothetical protein.
  
     0.585
KJL35952.1
Hypothetical protein.
       0.584
KJL35953.1
Hypothetical protein.
       0.584
KJL35954.1
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
       0.584
nudJ
Phosphatase NudJ; Belongs to the Nudix hydrolase family.
       0.537
appA
Oligopeptide-binding protein AppA precursor.
  
     0.513
arsB
Arsenical pump membrane protein.
  
     0.512
KJL37267.1
Hypothetical protein.
  
     0.461
KJL37205.1
Hypothetical protein.
  
     0.458
KJL35360.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.