STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhaBFHA domain-containing protein FhaB. (194 aa)    
Predicted Functional Partners:
spk1
Serine/threonine-protein kinase PK-1.
 
 
 
 0.999
pknB_1
Serine/threonine-protein kinase PknB.
 
 
 
 0.999
pknB_2
Serine/threonine-protein kinase PknB.
 
 
 
 0.999
kgd
Multifunctional 2-oxoglutarate metabolism enzyme.
    
 
 0.999
fhaA_2
FHA domain-containing protein FhaA.
 
   
 0.986
pknA
Serine/threonine-protein kinase PknA.
 
 
 
 0.917
pbpA
Penicillin-binding protein A.
 
   
 0.907
ftsW_2
Lipid II flippase FtsW; Belongs to the SEDS family.
 
   
 0.905
pstP_3
PP2C-family Ser/Thr phosphatase.
 
   
 0.894
pbpG
Penicillin-binding protein 2D.
   
  0.792
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.