STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL36043.1Putative thiamine biosynthesis protein. (363 aa)    
Predicted Functional Partners:
ssuC_4
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
  0.971
ssuC_5
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
  0.971
ssuB_1
Aliphatic sulfonates import ATP-binding protein SsuB.
 
 
  0.957
KJL36737.1
Binding-protein-dependent transport system inner membrane component.
 
 
  0.893
ssuC_2
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
  0.884
ssuC_6
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
  0.827
ssuC_3
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
  0.739
atzE_2
Biuret hydrolase; Belongs to the amidase family.
 
     0.695
puuR_2
HTH-type transcriptional regulator PuuR.
       0.690
cmpC
Bicarbonate transport ATP-binding protein CmpC.
 
 
  0.685
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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