STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sseAPutative thiosulfate sulfurtransferase SseA. (301 aa)    
Predicted Functional Partners:
KJL35703.1
Fe-S metabolism associated domain protein.
 
     0.929
metB
Cystathionine gamma-synthase.
 
 
 0.909
cysK
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.904
iscS
Cysteine desulfurase.
   
 0.902
cbs
Putative cystathionine beta-synthase.
  
 
 0.890
ldh2
L-lactate dehydrogenase 2; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
   
 
 0.886
moeZ_1
Putative adenylyltransferase/sulfurtransferase MoeZ.
   
 0.872
yedY
Sulfoxide reductase catalytic subunit YedY precursor.
 
  
 0.855
KJL38328.1
Putative FAD-linked oxidoreductase.
    
 0.820
nifS_1
Cysteine desulfurase.
   
 0.804
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.