Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL35564.1 | KJL35567.1 | RR49_02323 | RR49_02326 | Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. | Aminodeoxyfutalosine deaminase. | 0.573 |
KJL35564.1 | cdd | RR49_02323 | RR49_02324 | Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.777 |
KJL35564.1 | pdp | RR49_02323 | RR49_02325 | Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. | Pyrimidine-nucleoside phosphorylase. | 0.710 |
KJL35567.1 | KJL35564.1 | RR49_02326 | RR49_02323 | Aminodeoxyfutalosine deaminase. | Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. | 0.573 |
KJL35567.1 | cdd | RR49_02326 | RR49_02324 | Aminodeoxyfutalosine deaminase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.845 |
KJL35567.1 | pdp | RR49_02326 | RR49_02325 | Aminodeoxyfutalosine deaminase. | Pyrimidine-nucleoside phosphorylase. | 0.848 |
KJL35567.1 | punA | RR49_02326 | RR49_02335 | Aminodeoxyfutalosine deaminase. | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.958 |
KJL35567.1 | yhcR_1 | RR49_02326 | RR49_01385 | Aminodeoxyfutalosine deaminase. | Endonuclease YhcR precursor. | 0.892 |
KJL35567.1 | yhcR_2 | RR49_02326 | RR49_01388 | Aminodeoxyfutalosine deaminase. | Endonuclease YhcR precursor. | 0.735 |
KJL41376.1 | cdd | RR49_00328 | RR49_02324 | Uridine kinase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.914 |
KJL41376.1 | pdp | RR49_00328 | RR49_02325 | Uridine kinase. | Pyrimidine-nucleoside phosphorylase. | 0.414 |
KJL41376.1 | punA | RR49_00328 | RR49_02335 | Uridine kinase. | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.466 |
KJL41376.1 | udp | RR49_00328 | RR49_02098 | Uridine kinase. | Uridine phosphorylase. | 0.642 |
KJL41376.1 | yhcR_1 | RR49_00328 | RR49_01385 | Uridine kinase. | Endonuclease YhcR precursor. | 0.823 |
KJL41376.1 | yhcR_2 | RR49_00328 | RR49_01388 | Uridine kinase. | Endonuclease YhcR precursor. | 0.732 |
cdd | KJL35564.1 | RR49_02324 | RR49_02323 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. | 0.777 |
cdd | KJL35567.1 | RR49_02324 | RR49_02326 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Aminodeoxyfutalosine deaminase. | 0.845 |
cdd | KJL41376.1 | RR49_02324 | RR49_00328 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Uridine kinase. | 0.914 |
cdd | deoC | RR49_02324 | RR49_01324 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.765 |
cdd | pdp | RR49_02324 | RR49_02325 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Pyrimidine-nucleoside phosphorylase. | 0.999 |
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