STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL35641.1CobQ/CobB/MinD/ParA nucleotide binding domain protein. (418 aa)    
Predicted Functional Partners:
KJL35640.1
Hypothetical protein.
 
  
 0.968
pdtaS
Putative sensor histidine kinase pdtaS.
       0.797
KJL35436.1
Hypothetical protein.
 
   
 0.782
KJL35433.1
Hypothetical protein.
 
     0.773
KJL35435.1
Bacterial type II secretion system protein F domain protein.
 
    0.773
KJL35638.1
Hypothetical protein.
  
     0.771
KJL35432.1
Hypothetical protein.
  
     0.763
KJL35434.1
Hypothetical protein.
  
     0.739
KJL38248.1
Proteins of 100 residues with WXG; Belongs to the WXG100 family.
  
 
   0.650
KJL36825.1
Hypothetical protein.
  
     0.619
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.