STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL35649.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
sigR
ECF RNA polymerase sigma factor SigR; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.978
sigK
ECF RNA polymerase sigma factor SigK; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.865
cnrH
RNA polymerase sigma factor CnrH; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.865
KJL36981.1
Hypothetical protein.
  
 
 0.815
KJL34925.1
Hypothetical protein.
  
     0.773
KJL34990.1
Hypothetical protein.
  
     0.773
KJL35957.1
Hypothetical protein.
  
     0.770
KJL35674.1
Hypothetical protein.
  
     0.767
KJL35617.1
Hypothetical protein.
  
     0.762
KJL38251.1
Hypothetical protein.
  
     0.756
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.