STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glbOGroup 2 truncated hemoglobin GlbO. (141 aa)    
Predicted Functional Partners:
KJL41273.1
OsmC-like protein.
      0.906
ykuT
Putative MscS family protein YkuT.
       0.841
KJL35263.1
KsdD-like steroid dehydrogenase.
       0.798
malL
Oligo-1,6-glucosidase.
      0.714
pepN_2
Aminopeptidase N.
       0.669
rpiB
Ribose-5-phosphate isomerase B.
       0.511
KJL37829.1
DSBA-like thioredoxin domain protein.
  
  
 0.506
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
     0.482
nei1_2
Endonuclease 8 1; Belongs to the FPG family.
       0.467
oatA_2
O-acetyltransferase OatA.
 
     0.413
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.