STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL35264.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
rutD_3
Putative aminoacrylate hydrolase RutD.
  
     0.747
KJL35236.1
Hypothetical protein.
  
     0.747
tesB
Acyl-CoA thioesterase 2.
       0.674
KJL34915.1
Hypothetical protein.
  
     0.650
KJL35000.1
Hypothetical protein.
  
     0.650
KJL38572.1
Hypothetical protein.
  
     0.648
KJL36355.1
Hypothetical protein.
  
     0.638
KJL37281.1
Hypothetical protein.
  
     0.622
rpmF
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.612
KJL38843.1
SURF1 family protein.
  
     0.604
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.