STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL35420.1Hypothetical protein. (562 aa)    
Predicted Functional Partners:
comA
Transcriptional regulatory protein ComA.
  
  0.911
degU_1
Transcriptional regulatory protein DegU.
  
  0.769
degU_2
Transcriptional regulatory protein DegU.
   
  0.589
vraR_1
Response regulator protein VraR.
   
  0.589
vjbR
HTH-type quorum sensing-dependent transcriptional regulator VjbR.
   
  0.589
narL_2
Putative transcriptional regulatory protein NarL.
   
  0.589
vraR_2
Response regulator protein VraR.
   
  0.589
liaR
Transcriptional regulatory protein LiaR.
   
  0.589
pnbA
Para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family.
       0.581
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.