STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL34910.1L-gulono-1,4-lactone dehydrogenase. (437 aa)    
Predicted Functional Partners:
KJL34909.1
Hypothetical protein; Alanine racemase, N-terminal domain.
 
    0.950
KJL35006.1
Hypothetical protein; Alanine racemase, N-terminal domain.
 
    0.791
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
    
  0.778
etfA
Electron transfer flavoprotein subunit alpha.
  
 
 0.745
etfB
Electron transfer flavoprotein subunit beta.
  
 
 0.745
xylA_1
Xylose isomerase; Belongs to the xylose isomerase family.
    
  0.726
mdlB
(S)-mandelate dehydrogenase.
  
 0.718
gltB_1
Glutamate synthase [NADPH] large chain.
    
 0.716
KJL34911.1
LemA family protein.
       0.571
cdr_1
Coenzyme A disulfide reductase.
    
 0.566
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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