STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtcA2_2Carbonic anhydrase 2. (211 aa)    
Predicted Functional Partners:
dapH
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase.
    
 0.810
lpxD_1
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase.
    
 0.810
lpxD_2
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase.
    
 0.810
xseB_2
Exodeoxyribonuclease 7 small subunit.
       0.788
KJL34990.1
Hypothetical protein.
       0.788
xseA_2
Exodeoxyribonuclease 7 large subunit.
       0.772
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. Belongs to the purine/pyrimidine phosphoribosyltransferase family.
   
    0.689
fumC_2
Fumarate hydratase class II.
       0.686
ispH_2
4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
       0.575
KJL34986.1
Hypothetical protein.
       0.555
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.