Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL35070.1 | afr_3 | RR49_02967 | RR49_02966 | NYN domain protein. | 1,5-anhydro-D-fructose reductase. | 0.775 |
KJL35070.1 | dapE_5 | RR49_02967 | RR49_02965 | NYN domain protein. | Succinyl-diaminopimelate desuccinylase. | 0.565 |
KJL44619.1 | afr_3 | RR49_00129 | RR49_02966 | Xylose isomerase-like TIM barrel. | 1,5-anhydro-D-fructose reductase. | 0.487 |
KJL44619.1 | iolB | RR49_00129 | RR49_01882 | Xylose isomerase-like TIM barrel. | 5-deoxy-glucuronate isomerase. | 0.627 |
KJL44619.1 | iolD | RR49_00129 | RR49_01883 | Xylose isomerase-like TIM barrel. | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | 0.770 |
afr_3 | KJL35070.1 | RR49_02966 | RR49_02967 | 1,5-anhydro-D-fructose reductase. | NYN domain protein. | 0.775 |
afr_3 | KJL44619.1 | RR49_02966 | RR49_00129 | 1,5-anhydro-D-fructose reductase. | Xylose isomerase-like TIM barrel. | 0.487 |
afr_3 | cobB | RR49_02966 | RR49_02252 | 1,5-anhydro-D-fructose reductase. | NAD-dependent protein deacetylase. | 0.565 |
afr_3 | dapE_5 | RR49_02966 | RR49_02965 | 1,5-anhydro-D-fructose reductase. | Succinyl-diaminopimelate desuccinylase. | 0.574 |
afr_3 | iolB | RR49_02966 | RR49_01882 | 1,5-anhydro-D-fructose reductase. | 5-deoxy-glucuronate isomerase. | 0.622 |
afr_3 | iolD | RR49_02966 | RR49_01883 | 1,5-anhydro-D-fructose reductase. | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | 0.643 |
afr_3 | iolE_1 | RR49_02966 | RR49_01884 | 1,5-anhydro-D-fructose reductase. | Inosose dehydratase. | 0.631 |
afr_3 | iolE_2 | RR49_02966 | RR49_01893 | 1,5-anhydro-D-fructose reductase. | Inosose dehydratase. | 0.631 |
afr_3 | lly | RR49_02966 | RR49_02178 | 1,5-anhydro-D-fructose reductase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.545 |
afr_3 | suhB | RR49_02966 | RR49_01853 | 1,5-anhydro-D-fructose reductase. | Inositol-1-monophosphatase. | 0.498 |
cobB | afr_3 | RR49_02252 | RR49_02966 | NAD-dependent protein deacetylase. | 1,5-anhydro-D-fructose reductase. | 0.565 |
dapE_5 | KJL35070.1 | RR49_02965 | RR49_02967 | Succinyl-diaminopimelate desuccinylase. | NYN domain protein. | 0.565 |
dapE_5 | afr_3 | RR49_02965 | RR49_02966 | Succinyl-diaminopimelate desuccinylase. | 1,5-anhydro-D-fructose reductase. | 0.574 |
iolB | KJL44619.1 | RR49_01882 | RR49_00129 | 5-deoxy-glucuronate isomerase. | Xylose isomerase-like TIM barrel. | 0.627 |
iolB | afr_3 | RR49_01882 | RR49_02966 | 5-deoxy-glucuronate isomerase. | 1,5-anhydro-D-fructose reductase. | 0.622 |
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