Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMY_0087 | BMY_0471 | BMY_0087 | BMY_0471 | Hypothetical protein. | Hypothetical protein. | 0.814 |
BMY_0087 | BMY_0499 | BMY_0087 | BMY_0499 | Hypothetical protein. | Dihydrolipoamide dehydrogenase. | 0.898 |
BMY_0087 | BMY_0529 | BMY_0087 | BMY_0529 | Hypothetical protein. | Formate acetyltransferase. | 0.838 |
BMY_0087 | BMY_1942 | BMY_0087 | BMY_1942 | Hypothetical protein. | Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.869 |
BMY_0087 | BMY_2067 | BMY_0087 | BMY_2067 | Hypothetical protein. | Hypothetical protein. | 0.897 |
BMY_0087 | BMY_2068 | BMY_0087 | BMY_2068 | Hypothetical protein. | Hypothetical protein. | 0.905 |
BMY_0087 | ackA | BMY_0087 | BMY_0472 | Hypothetical protein. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.403 |
BMY_0469 | BMY_0470 | BMY_0469 | BMY_0470 | Protein rnfH; Belongs to the UPF0125 (RnfH) family. | Ubiquinone-binding protein. | 0.884 |
BMY_0469 | BMY_0471 | BMY_0469 | BMY_0471 | Protein rnfH; Belongs to the UPF0125 (RnfH) family. | Hypothetical protein. | 0.648 |
BMY_0469 | ackA | BMY_0469 | BMY_0472 | Protein rnfH; Belongs to the UPF0125 (RnfH) family. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.545 |
BMY_0470 | BMY_0469 | BMY_0470 | BMY_0469 | Ubiquinone-binding protein. | Protein rnfH; Belongs to the UPF0125 (RnfH) family. | 0.884 |
BMY_0470 | BMY_0471 | BMY_0470 | BMY_0471 | Ubiquinone-binding protein. | Hypothetical protein. | 0.648 |
BMY_0470 | ackA | BMY_0470 | BMY_0472 | Ubiquinone-binding protein. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.545 |
BMY_0471 | BMY_0087 | BMY_0471 | BMY_0087 | Hypothetical protein. | Hypothetical protein. | 0.814 |
BMY_0471 | BMY_0469 | BMY_0471 | BMY_0469 | Hypothetical protein. | Protein rnfH; Belongs to the UPF0125 (RnfH) family. | 0.648 |
BMY_0471 | BMY_0470 | BMY_0471 | BMY_0470 | Hypothetical protein. | Ubiquinone-binding protein. | 0.648 |
BMY_0471 | BMY_0499 | BMY_0471 | BMY_0499 | Hypothetical protein. | Dihydrolipoamide dehydrogenase. | 0.686 |
BMY_0471 | BMY_0529 | BMY_0471 | BMY_0529 | Hypothetical protein. | Formate acetyltransferase. | 0.817 |
BMY_0471 | BMY_1942 | BMY_0471 | BMY_1942 | Hypothetical protein. | Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.871 |
BMY_0471 | BMY_2067 | BMY_0471 | BMY_2067 | Hypothetical protein. | Hypothetical protein. | 0.814 |
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