Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMY_0846 | BMY_0848 | BMY_0846 | BMY_0848 | Hypothetical protein. | Hypothetical protein. | 0.850 |
BMY_0846 | BMY_0850 | BMY_0846 | BMY_0850 | Hypothetical protein. | Hypothetical protein. | 0.884 |
BMY_0846 | BMY_0852 | BMY_0846 | BMY_0852 | Hypothetical protein. | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | 0.795 |
BMY_0846 | argD | BMY_0846 | BMY_1041 | Hypothetical protein. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.654 |
BMY_0846 | speE | BMY_0846 | BMY_0847 | Hypothetical protein. | Spermidine synthase 1; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.974 |
BMY_0848 | BMY_0846 | BMY_0848 | BMY_0846 | Hypothetical protein. | Hypothetical protein. | 0.850 |
BMY_0848 | BMY_0850 | BMY_0848 | BMY_0850 | Hypothetical protein. | Hypothetical protein. | 0.915 |
BMY_0848 | BMY_0852 | BMY_0848 | BMY_0852 | Hypothetical protein. | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | 0.603 |
BMY_0848 | speE | BMY_0848 | BMY_0847 | Hypothetical protein. | Spermidine synthase 1; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.777 |
BMY_0850 | BMY_0846 | BMY_0850 | BMY_0846 | Hypothetical protein. | Hypothetical protein. | 0.884 |
BMY_0850 | BMY_0848 | BMY_0850 | BMY_0848 | Hypothetical protein. | Hypothetical protein. | 0.915 |
BMY_0850 | BMY_0852 | BMY_0850 | BMY_0852 | Hypothetical protein. | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | 0.844 |
BMY_0850 | speE | BMY_0850 | BMY_0847 | Hypothetical protein. | Spermidine synthase 1; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.891 |
BMY_0852 | BMY_0846 | BMY_0852 | BMY_0846 | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | Hypothetical protein. | 0.795 |
BMY_0852 | BMY_0848 | BMY_0852 | BMY_0848 | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | Hypothetical protein. | 0.603 |
BMY_0852 | BMY_0850 | BMY_0852 | BMY_0850 | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | Hypothetical protein. | 0.844 |
BMY_0852 | BMY_1891 | BMY_0852 | BMY_1891 | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | Hypothetical protein; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.630 |
BMY_0852 | BMY_1976 | BMY_0852 | BMY_1976 | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | Hypothetical protein; In the C-terminal section; belongs to the NAD synthetase family. | 0.698 |
BMY_0852 | argD | BMY_0852 | BMY_1041 | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.626 |
BMY_0852 | lysA | BMY_0852 | BMY_1268 | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.723 |
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