STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMY_1291Hypothetical protein. (289 aa)    
Predicted Functional Partners:
BMY_1698
Cytochrome c oxidase, cbb3-type subunit I; Belongs to the heme-copper respiratory oxidase family.
 
     0.789
BMY_1702
Cytochrome c oxidase accessory protein CcoG.
 
     0.785
BMY_1699
Hypothetical protein F387_00720.
 
     0.784
BMY_1701
Cytochrome c oxidase, cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
     0.762
BMY_1704
Hypothetical protein.
 
     0.724
BMY_1290
Polyketide biosynthesis zinc-dependent hydrolase BaeB.
       0.538
BMY_1289
Hypothetical protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.490
BMY_1288
CoA-disulfide reductase.
       0.486
BMY_0631
Oxygen-independent coproporphyrinogen-III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
   
 0.452
BMY_1292
Hypothetical protein.
       0.430
Your Current Organism:
Wohlfahrtiimonas chitiniclastica
NCBI taxonomy Id: 400946
Other names: CCM 7401, DSM 18708, Ignatzschineria sp. 5401129, W. chitiniclastica, Wohlfahrtiimonas chitiniclastica Toth et al. 2008, strain S5
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