STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMY_1739Alcohol dehydrogenase. (360 aa)    
Predicted Functional Partners:
BMY_2063
Hypothetical protein.
   
 
  0.768
BMY_0182
Hypothetical protein.
  
 
 0.738
BMY_0376
8-amino-7-oxononanoate synthase.
 
 
 0.690
BMY_0330
CTP pyrophosphohydrolase.
 
      0.657
BMY_0621
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.637
BMY_0366
Hypothetical protein.
   
 
 0.613
BMY_2061
Hypothetical protein.
    
 0.542
BMY_0186
(R,R)-butanediol dehydrogenase.
  
  
 
0.519
BMY_0187
Hypothetical protein.
  
  
 
0.513
BMY_1976
Hypothetical protein; In the C-terminal section; belongs to the NAD synthetase family.
  
 0.505
Your Current Organism:
Wohlfahrtiimonas chitiniclastica
NCBI taxonomy Id: 400946
Other names: CCM 7401, DSM 18708, Ignatzschineria sp. 5401129, W. chitiniclastica, Wohlfahrtiimonas chitiniclastica Toth et al. 2008, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.