Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMY_1038 | BMY_1979 | BMY_1038 | BMY_1979 | GMP synthase. | Nitronate monooxygenase. | 0.805 |
BMY_1038 | guaA | BMY_1038 | BMY_1969 | GMP synthase. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.808 |
BMY_1079 | BMY_1375 | BMY_1079 | BMY_1375 | Malonyl CoA-acyl carrier protein transacylase. | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.786 |
BMY_1079 | BMY_1979 | BMY_1079 | BMY_1979 | Malonyl CoA-acyl carrier protein transacylase. | Nitronate monooxygenase. | 0.819 |
BMY_1079 | lipB | BMY_1079 | BMY_1983 | Malonyl CoA-acyl carrier protein transacylase. | Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.618 |
BMY_1375 | BMY_1079 | BMY_1375 | BMY_1079 | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | Malonyl CoA-acyl carrier protein transacylase. | 0.786 |
BMY_1375 | BMY_1979 | BMY_1375 | BMY_1979 | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | Nitronate monooxygenase. | 0.763 |
BMY_1978 | BMY_1979 | BMY_1978 | BMY_1979 | Alpha/beta hydrolase. | Nitronate monooxygenase. | 0.773 |
BMY_1978 | BMY_1980 | BMY_1978 | BMY_1980 | Alpha/beta hydrolase. | Deoxyribonuclease YjjV. | 0.768 |
BMY_1978 | BMY_1981 | BMY_1978 | BMY_1981 | Alpha/beta hydrolase. | Transporter ydfM; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.768 |
BMY_1978 | lipA | BMY_1978 | BMY_1982 | Alpha/beta hydrolase. | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.767 |
BMY_1978 | lipB | BMY_1978 | BMY_1983 | Alpha/beta hydrolase. | Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.767 |
BMY_1978 | nth | BMY_1978 | BMY_1984 | Alpha/beta hydrolase. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.767 |
BMY_1979 | BMY_1038 | BMY_1979 | BMY_1038 | Nitronate monooxygenase. | GMP synthase. | 0.805 |
BMY_1979 | BMY_1079 | BMY_1979 | BMY_1079 | Nitronate monooxygenase. | Malonyl CoA-acyl carrier protein transacylase. | 0.819 |
BMY_1979 | BMY_1375 | BMY_1979 | BMY_1375 | Nitronate monooxygenase. | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.763 |
BMY_1979 | BMY_1978 | BMY_1979 | BMY_1978 | Nitronate monooxygenase. | Alpha/beta hydrolase. | 0.773 |
BMY_1979 | BMY_1980 | BMY_1979 | BMY_1980 | Nitronate monooxygenase. | Deoxyribonuclease YjjV. | 0.768 |
BMY_1979 | BMY_1981 | BMY_1979 | BMY_1981 | Nitronate monooxygenase. | Transporter ydfM; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.768 |
BMY_1979 | guaA | BMY_1979 | BMY_1969 | Nitronate monooxygenase. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.805 |
page 1 of 3