STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMY_2124Tetracycline efflux MFS transporter Tet(H). (400 aa)    
Predicted Functional Partners:
BMY_2123
TetR family transcriptional regulator.
 
     0.866
BMY_2178
TetR family transcriptional regulator.
 
     0.721
BMY_0994
Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase.
     
 0.681
BMY_1312
P-protein.
     
 0.640
BMY_1350
Hypothetical protein.
   
 
  0.592
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
      0.527
BMY_0432
Hypothetical protein.
 
     0.465
Your Current Organism:
Wohlfahrtiimonas chitiniclastica
NCBI taxonomy Id: 400946
Other names: CCM 7401, DSM 18708, Ignatzschineria sp. 5401129, W. chitiniclastica, Wohlfahrtiimonas chitiniclastica Toth et al. 2008, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.