STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV83540.1PFAM: TonB-dependent receptor plug; KEGG: sus:Acid_3690 TonB-dependent receptor, plug. (1078 aa)    
Predicted Functional Partners:
ADV84750.1
TIGRFAM: TonB family protein; KEGG: aca:ACP_2139 TonB domain protein.
  
   0.779
ADV84330.1
TIGRFAM: VWFA-related Acidobacterial domain protein; KEGG: aca:ACP_1808 hypothetical protein.
  
     0.770
ADV82918.1
KEGG: aca:ACP_1367 hypothetical protein.
  
     0.765
ADV83893.1
KEGG: aca:ACP_3408 hypothetical protein.
  
     0.764
ADV82927.1
KEGG: aba:Acid345_4293 hypothetical protein.
  
     0.763
ADV81204.1
TIGRFAM: VWFA-related Acidobacterial domain protein; PFAM: von Willebrand factor type A; KEGG: aba:Acid345_3993 von Willebrand factor, type A; SMART: von Willebrand factor type A.
  
     0.762
ADV81773.1
TIGRFAM: VWFA-related Acidobacterial domain protein; PFAM: von Willebrand factor type A; KEGG: aba:Acid345_2506 von Willebrand factor, type A; SMART: von Willebrand factor type A.
  
     0.762
ADV81680.1
TIGRFAM: VWFA-related Acidobacterial domain protein; PFAM: von Willebrand factor type A; KEGG: aca:ACP_1760 hypothetical protein; SMART: von Willebrand factor type A.
  
     0.758
ADV83829.1
KEGG: aca:ACP_1760 hypothetical protein; TIGRFAM: VWFA-related Acidobacterial domain protein; SMART: von Willebrand factor type A.
  
     0.754
ADV81208.1
TIGRFAM: VWFA-related Acidobacterial domain protein; PFAM: von Willebrand factor type A; KEGG: aca:ACP_1808 hypothetical protein; SMART: von Willebrand factor type A.
  
     0.753
Your Current Organism:
Terriglobus saanensis
NCBI taxonomy Id: 401053
Other names: Acidobacterium sp. SP1PR4, T. saanensis SP1PR4, Terriglobus saanensis SP1PR4, Terriglobus saanensis str. SP1PR4, Terriglobus saanensis strain SP1PR4, Terriglobus sp. SP1PR4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.