STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV84312.1PFAM: Cupin 2 conserved barrel domain protein; KEGG: msm:MSMEG_3484 cupin domain-containing protein. (169 aa)    
Predicted Functional Partners:
ADV83297.1
Hypothetical protein; KEGG: cwo:Cwoe_4101 peptidase S15.
  
     0.722
ADV83127.1
Helix-turn-helix domain protein; KEGG: aba:Acid345_4570 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.694
ADV83292.1
Hypothetical protein; KEGG: sus:Acid_4657 Ig domain-containing protein.
  
     0.680
ADV83521.1
PFAM: Carbohydrate-selective porin OprB; KEGG: caa:Caka_2622 carbohydrate-selective porin OprB; Belongs to the OprB family.
  
     0.671
ADV84501.1
PFAM: UvrD/REP helicase; protein of unknown function DUF955; KEGG: sjp:SJA_C1-20360 putative ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
  
   
 0.671
ADV81280.1
KEGG: aca:ACP_1799 hypothetical protein.
  
     0.653
ADV81048.1
PFAM: Ig family protein; KEGG: aca:ACP_1394 Ig domain protein.
  
     0.633
ADV84502.1
KEGG: hba:Hbal_0676 hypothetical protein.
  
     0.627
ADV81573.1
PFAM: GAF domain protein; KEGG: cyt:cce_1186 two-component hybrid sensor and regulator.
  
   
 0.623
ADV84122.1
KEGG: xal:XALc_2834 hypothetical protein.
  
     0.615
Your Current Organism:
Terriglobus saanensis
NCBI taxonomy Id: 401053
Other names: Acidobacterium sp. SP1PR4, T. saanensis SP1PR4, Terriglobus saanensis SP1PR4, Terriglobus saanensis str. SP1PR4, Terriglobus saanensis strain SP1PR4, Terriglobus sp. SP1PR4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.