STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV84688.1PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sus:Acid_5599 alcohol dehydrogenase. (328 aa)    
Predicted Functional Partners:
ADV84256.1
KEGG: aca:ACP_1923 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase.
 
    
 0.649
ADV84689.1
SMART: regulatory protein ArsR; KEGG: aca:ACP_2456 ArsR family transcriptional regulatory protein.
       0.581
ADV84687.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aca:ACP_2458 oxidoreductase, short chain dehydrogenase/reductase family.
  
   0.562
ADV82913.1
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.490
ADV81126.1
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.461
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
       0.403
Your Current Organism:
Terriglobus saanensis
NCBI taxonomy Id: 401053
Other names: Acidobacterium sp. SP1PR4, T. saanensis SP1PR4, Terriglobus saanensis SP1PR4, Terriglobus saanensis str. SP1PR4, Terriglobus saanensis strain SP1PR4, Terriglobus sp. SP1PR4
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