STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crgAConserved hypothetical protein; Involved in cell division; Belongs to the CrgA family. (150 aa)    
Predicted Functional Partners:
ftsI
ftsI Peptidoglycan synthetase FtsI, penicillin-binding protein.
 
 
 
 0.869
ftsQ
ftsQ Cell division protein ftsQ.
  
 
 
 0.863
ftsZ-2
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.811
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
      
 0.787
BDP_0040
Penicillin-binding protein transpeptidase.
   
 
 0.781
BDP_1625
Aminoglycoside phosphotransferase.
  
     0.772
BDP_0398
DNA and RNA helicase related protein.
  
     0.764
BDP_0203
Conserved hypothetical protein.
  
     0.753
sepF
Full Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
      
 0.701
BDP_1306
Conserved hypothetical membrane spanning protein.
  
     0.680
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.