STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_0109Sucrose phosphorylase. (504 aa)    
Predicted Functional Partners:
fosC
FosC Beta-fructofuranosidase; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.984
BDP_2170
Sucrose-6-phosphate hydrolase; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.947
BDP_0029
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.928
BDP_1029
Pullulanase.
  
 
 0.927
apuB
ApuB Amylopullulanase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.927
malQ2
malQ2 4-alpha-glucanotransferase.
  
 
 0.916
malQ1
MalQ1 4-alpha-glucanotransferase.
  
 
 0.916
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 
 0.915
pgm
Pgm Phosphoglucomutase.
  
 
 0.910
BDP_1081
Glycosyltransferase.
  
 0.909
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.