STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_0151Oxidoreductase in aldo-keto reductase family. (354 aa)    
Predicted Functional Partners:
BDP_0370
Oxidoreductase, aldo/keto reductase family.
  
  
 
0.906
BDP_0809
Pyridoxine kinase; Belongs to the pyridoxine kinase family.
    
 0.902
BDP_0152
MarR-type transcriptional regulator.
  
  
 0.670
BDP_1903
Aldo/keto reductase family oxidoreductase.
 
 
 0.640
BDP_1056
Aldo/keto reductase.
  
     0.513
BDP_1167
MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.490
BDP_2007
Glycerol uptake facilitator-like protein in Mip family; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.490
BDP_1595
Aldo/keto reductase family.
 
 
0.475
BDP_1397
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.450
BDP_0153
ABC-type transporter, permease component.
  
 
 0.433
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.