STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_0179Possible adhesin. (519 aa)    
Predicted Functional Partners:
BDP_0588
Phage-related portal protein.
  
   0.729
BDP_1473
3-hydroxy-3-methylglutaryl CoA synthase.
  
   0.685
BDP_0180
Hypothetical protein.
       0.648
BDP_1401
Putative DNA binding protein.
   
 
 0.598
BDP_0124
Beta-glucosidase.
   
   0.489
bgl
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
   0.489
BDP_0122
Sialic acidspecific 9-O-acetylesterase.
  
 
 0.475
BDP_0123
Acetyl esterase.
  
 
 0.475
BDP_1112
GDSL-like lipase/acylhydrolase.
  
 
 0.475
BDP_2062
Sialic acid-specific 9-O-acetylesterase.
  
 
 0.475
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.