BDP_0287 protein (Bifidobacterium dentium) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

BDP_0287

ATP-binding protein of ABC transporter system; Belongs to the ABC transporter superfamily. (406 aa)

Predicted Functional Partners:

BDP_0286

0.995

BDP_0284

0.993

BDP_0285

0.993

BDP_2134

0.976

BDP_2137

0.972

BDP_2136

0.968

BDP_2138

0.912

BDP_0153

0.817

BDP_0154

0.800

BDP_0544

0.626

Your Current Organism:

Bifidobacterium dentium

NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
BDP_0153	BDP_0154	ABC-type transporter, permease component.	ABC-type transporter, permease component.	0.893
BDP_0153	BDP_0287	ABC-type transporter, permease component.	ATP-binding protein of ABC transporter system; Belongs to the ABC transporter superfamily.	0.817
BDP_0154	BDP_0153	ABC-type transporter, permease component.	ABC-type transporter, permease component.	0.893
BDP_0154	BDP_0287	ABC-type transporter, permease component.	ATP-binding protein of ABC transporter system; Belongs to the ABC transporter superfamily.	0.800
BDP_0154	BDP_2138	ABC-type transporter, permease component.	ATP-binding protein of ABC transporter system; Belongs to the ABC transporter superfamily.	0.546
BDP_0284	BDP_0285	Solute binding protein of ABC transporter system.	Permease protein of ABC transporter system.	0.996
BDP_0284	BDP_0286	Solute binding protein of ABC transporter system.	Permease protein of ABC transporter system.	0.996
BDP_0284	BDP_0287	Solute binding protein of ABC transporter system.	ATP-binding protein of ABC transporter system; Belongs to the ABC transporter superfamily.	0.993
BDP_0284	BDP_2134	Solute binding protein of ABC transporter system.	ABC transporter permease protein.	0.907
BDP_0284	BDP_2136	Solute binding protein of ABC transporter system.	Binding-protein-dependent transport systems inner membrane component.	0.904
BDP_0284	BDP_2137	Solute binding protein of ABC transporter system.	ABC transporter binding protein.	0.901
BDP_0284	BDP_2138	Solute binding protein of ABC transporter system.	ATP-binding protein of ABC transporter system; Belongs to the ABC transporter superfamily.	0.939
BDP_0285	BDP_0284	Permease protein of ABC transporter system.	Solute binding protein of ABC transporter system.	0.996
BDP_0285	BDP_0286	Permease protein of ABC transporter system.	Permease protein of ABC transporter system.	0.997
BDP_0285	BDP_0287	Permease protein of ABC transporter system.	ATP-binding protein of ABC transporter system; Belongs to the ABC transporter superfamily.	0.993
BDP_0285	BDP_2134	Permease protein of ABC transporter system.	ABC transporter permease protein.	0.944
BDP_0285	BDP_2136	Permease protein of ABC transporter system.	Binding-protein-dependent transport systems inner membrane component.	0.900
BDP_0285	BDP_2137	Permease protein of ABC transporter system.	ABC transporter binding protein.	0.911
BDP_0285	BDP_2138	Permease protein of ABC transporter system.	ATP-binding protein of ABC transporter system; Belongs to the ABC transporter superfamily.	0.933
BDP_0286	BDP_0284	Permease protein of ABC transporter system.	Solute binding protein of ABC transporter system.	0.996