BDP_0337 protein (Bifidobacterium dentium) - STRING interaction network

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Score

BDP_0337

lepB Signal peptidase I; Belongs to the peptidase S26 family. (248 aa)

Predicted Functional Partners:

BDP_0338

0.844

rplS

0.790

gpi

0.469

BDP_0339

0.465

BDP_0340

0.465

pnp

0.464

lepA

0.460

rimM

0.420

BDP_1419

0.420

nusA

0.409

Your Current Organism:

Bifidobacterium dentium

NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP_0337	BDP_0338	BDP_0337	BDP_0338	lepB Signal peptidase I; Belongs to the peptidase S26 family.	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.844
BDP_0337	BDP_0339	BDP_0337	BDP_0339	lepB Signal peptidase I; Belongs to the peptidase S26 family.	ATP-binding protein of ABC transporter system.	0.465
BDP_0337	BDP_0340	BDP_0337	BDP_0340	lepB Signal peptidase I; Belongs to the peptidase S26 family.	ATP-binding protein of ABC transporter system.	0.465
BDP_0337	BDP_1419	BDP_0337	BDP_1419	lepB Signal peptidase I; Belongs to the peptidase S26 family.	Ribosome-associated factor Y.	0.420
BDP_0337	gpi	BDP_0337	BDP_0335	lepB Signal peptidase I; Belongs to the peptidase S26 family.	Gpi Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.469
BDP_0337	lepA	BDP_0337	BDP_1076	lepB Signal peptidase I; Belongs to the peptidase S26 family.	GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.	0.460
BDP_0337	nusA	BDP_0337	BDP_0463	lepB Signal peptidase I; Belongs to the peptidase S26 family.	nusA N utilization substance protein A; Participates in both transcription termination and antitermination.	0.409
BDP_0337	pnp	BDP_0337	BDP_0367	lepB Signal peptidase I; Belongs to the peptidase S26 family.	Pnp Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.464
BDP_0337	rimM	BDP_0337	BDP_0310	lepB Signal peptidase I; Belongs to the peptidase S26 family.	rimM 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	0.420
BDP_0337	rplS	BDP_0337	BDP_0336	lepB Signal peptidase I; Belongs to the peptidase S26 family.	rplS LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.790
BDP_0338	BDP_0337	BDP_0338	BDP_0337	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	lepB Signal peptidase I; Belongs to the peptidase S26 family.	0.844
BDP_0338	BDP_0339	BDP_0338	BDP_0339	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	ATP-binding protein of ABC transporter system.	0.513
BDP_0338	BDP_0340	BDP_0338	BDP_0340	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	ATP-binding protein of ABC transporter system.	0.490
BDP_0338	gpi	BDP_0338	BDP_0335	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	Gpi Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.501
BDP_0338	rplS	BDP_0338	BDP_0336	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	rplS LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.870
BDP_0339	BDP_0337	BDP_0339	BDP_0337	ATP-binding protein of ABC transporter system.	lepB Signal peptidase I; Belongs to the peptidase S26 family.	0.465
BDP_0339	BDP_0338	BDP_0339	BDP_0338	ATP-binding protein of ABC transporter system.	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.513
BDP_0339	BDP_0340	BDP_0339	BDP_0340	ATP-binding protein of ABC transporter system.	ATP-binding protein of ABC transporter system.	0.900
BDP_0339	rplS	BDP_0339	BDP_0336	ATP-binding protein of ABC transporter system.	rplS LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.430
BDP_0340	BDP_0337	BDP_0340	BDP_0337	ATP-binding protein of ABC transporter system.	lepB Signal peptidase I; Belongs to the peptidase S26 family.	0.465