BDP_0339 protein (Bifidobacterium dentium) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

BDP_0339

ATP-binding protein of ABC transporter system. (281 aa)

Predicted Functional Partners:

BDP_0340

0.920

BDP_0817

0.773

BDP_0711

0.762

BDP_2016

0.699

BDP_1496

0.677

BDP_0167

0.653

BDP_1060

0.623

BDP_0166

0.597

BDP_0338

0.583

BDP_0140

0.577

Your Current Organism:

Bifidobacterium dentium

NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
BDP_0140	BDP_0339	ABC-type transporter.	ATP-binding protein of ABC transporter system.	0.577
BDP_0166	BDP_0167	ABC-type transporter, permease component.	ABC-type transporter, permease component.	0.879
BDP_0166	BDP_0339	ABC-type transporter, permease component.	ATP-binding protein of ABC transporter system.	0.597
BDP_0166	BDP_0711	ABC-type transporter, permease component.	Permease protein of ABC transporter system.	0.591
BDP_0167	BDP_0166	ABC-type transporter, permease component.	ABC-type transporter, permease component.	0.879
BDP_0167	BDP_0339	ABC-type transporter, permease component.	ATP-binding protein of ABC transporter system.	0.653
BDP_0167	BDP_0711	ABC-type transporter, permease component.	Permease protein of ABC transporter system.	0.771
BDP_0338	BDP_0339	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	ATP-binding protein of ABC transporter system.	0.583
BDP_0338	BDP_0340	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	ATP-binding protein of ABC transporter system.	0.560
BDP_0339	BDP_0140	ATP-binding protein of ABC transporter system.	ABC-type transporter.	0.577
BDP_0339	BDP_0166	ATP-binding protein of ABC transporter system.	ABC-type transporter, permease component.	0.597
BDP_0339	BDP_0167	ATP-binding protein of ABC transporter system.	ABC-type transporter, permease component.	0.653
BDP_0339	BDP_0338	ATP-binding protein of ABC transporter system.	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.583
BDP_0339	BDP_0340	ATP-binding protein of ABC transporter system.	ATP-binding protein of ABC transporter system.	0.920
BDP_0339	BDP_0711	ATP-binding protein of ABC transporter system.	Permease protein of ABC transporter system.	0.762
BDP_0339	BDP_0817	ATP-binding protein of ABC transporter system.	Permease protein of ABC transporter system.	0.773
BDP_0339	BDP_1060	ATP-binding protein of ABC transporter system.	ABC transporter, permease protein.	0.623
BDP_0339	BDP_1496	ATP-binding protein of ABC transporter system.	Permease protein of ABC transporter system.	0.677
BDP_0339	BDP_2016	ATP-binding protein of ABC transporter system.	ATP-binding protein of ABC transporter system.	0.699
BDP_0340	BDP_0338	ATP-binding protein of ABC transporter system.	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.560