dapE protein (Bifidobacterium dentium) - STRING interaction network

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Score

dapE

dapE Succinyl-diaminopimelate desuccinylase. (401 aa)

Predicted Functional Partners:

dapF

0.971

argD

0.912

argD-2

0.912

BDP_0411

0.835

dapD

0.710

BDP_0341

0.673

dapB

0.613

rne

0.594

lysA

0.550

argC

0.524

Your Current Organism:

Bifidobacterium dentium

NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP_0341	dapE	BDP_0341	BDP_0343	Hypothetical transporter.	dapE Succinyl-diaminopimelate desuccinylase.	0.673
BDP_0341	rne	BDP_0341	BDP_0344	Hypothetical transporter.	Rne Ribonuclease G.	0.458
BDP_0411	dapB	BDP_0411	BDP_1762	Aminotransferase.	DapB dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.	0.622
BDP_0411	dapD	BDP_0411	BDP_0637	Aminotransferase.	dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.	0.731
BDP_0411	dapE	BDP_0411	BDP_0343	Aminotransferase.	dapE Succinyl-diaminopimelate desuccinylase.	0.835
BDP_0411	dapF	BDP_0411	BDP_1629	Aminotransferase.	DapF Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine.	0.704
BDP_0411	lysA	BDP_0411	BDP_1931	Aminotransferase.	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	0.731
argC	argD	BDP_1296	BDP_1065	argC N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.	Acetylornithine and succinylornithine aminotransferase.	0.987
argC	argD-2	BDP_1296	BDP_1293	argC N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.	argD Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.	0.998
argC	dapE	BDP_1296	BDP_0343	argC N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.	dapE Succinyl-diaminopimelate desuccinylase.	0.524
argD	argC	BDP_1065	BDP_1296	Acetylornithine and succinylornithine aminotransferase.	argC N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.	0.987
argD	argD-2	BDP_1065	BDP_1293	Acetylornithine and succinylornithine aminotransferase.	argD Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.	0.915
argD	dapD	BDP_1065	BDP_0637	Acetylornithine and succinylornithine aminotransferase.	dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.	0.911
argD	dapE	BDP_1065	BDP_0343	Acetylornithine and succinylornithine aminotransferase.	dapE Succinyl-diaminopimelate desuccinylase.	0.912
argD-2	argC	BDP_1293	BDP_1296	argD Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.	argC N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.	0.998
argD-2	argD	BDP_1293	BDP_1065	argD Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.	Acetylornithine and succinylornithine aminotransferase.	0.915
argD-2	dapD	BDP_1293	BDP_0637	argD Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.	dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.	0.911
argD-2	dapE	BDP_1293	BDP_0343	argD Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.	dapE Succinyl-diaminopimelate desuccinylase.	0.912
dapB	BDP_0411	BDP_1762	BDP_0411	DapB dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.	Aminotransferase.	0.622
dapB	dapD	BDP_1762	BDP_0637	DapB dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.	dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.	0.964