STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_0364Putative glycosidase. (604 aa)    
Predicted Functional Partners:
BDP_0111
Oligo-1,6-glucosidase.
 
  
  0.965
agl3
Agl3 Alpha-glucosidase.
 
  
 
0.927
agl2
Agl2 Alpha-glucosidase.
  
  
 
0.925
agl2-2
Agl2 Alpha-glucosidase.
  
  
 
0.925
fosC
FosC Beta-fructofuranosidase; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.910
BDP_2170
Sucrose-6-phosphate hydrolase; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.910
BDP_0109
Sucrose phosphorylase.
     
  0.900
acpS
Putative holo-[acyl-carrier protein] synthase3; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
       0.676
ptsG
ptsG PTS system, glucose-specific IIABC component.
  
  
 0.596
BDP_1930
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1(PTS system).
  
  
 0.596
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.