lemA protein (Bifidobacterium dentium) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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[Homology]

Score

lemA

lemA LemA protein. (187 aa)

Predicted Functional Partners:

BDP_0369

0.776

pnp

0.628

BDP_0370

0.576

rpsO

0.424

Your Current Organism:

Bifidobacterium dentium

NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP_0369	BDP_0370	BDP_0369	BDP_0370	Conserved hypothetical membrane spanning protein.	Oxidoreductase, aldo/keto reductase family.	0.659
BDP_0369	lemA	BDP_0369	BDP_0368	Conserved hypothetical membrane spanning protein.	lemA LemA protein.	0.776
BDP_0369	pnp	BDP_0369	BDP_0367	Conserved hypothetical membrane spanning protein.	Pnp Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.516
BDP_0370	BDP_0369	BDP_0370	BDP_0369	Oxidoreductase, aldo/keto reductase family.	Conserved hypothetical membrane spanning protein.	0.659
BDP_0370	lemA	BDP_0370	BDP_0368	Oxidoreductase, aldo/keto reductase family.	lemA LemA protein.	0.576
lemA	BDP_0369	BDP_0368	BDP_0369	lemA LemA protein.	Conserved hypothetical membrane spanning protein.	0.776
lemA	BDP_0370	BDP_0368	BDP_0370	lemA LemA protein.	Oxidoreductase, aldo/keto reductase family.	0.576
lemA	pnp	BDP_0368	BDP_0367	lemA LemA protein.	Pnp Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.628
lemA	rpsO	BDP_0368	BDP_0366	lemA LemA protein.	rpsO SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.424
pnp	BDP_0369	BDP_0367	BDP_0369	Pnp Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	Conserved hypothetical membrane spanning protein.	0.516
pnp	lemA	BDP_0367	BDP_0368	Pnp Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	lemA LemA protein.	0.628
pnp	rpsO	BDP_0367	BDP_0366	Pnp Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	rpsO SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.867
rpsO	lemA	BDP_0366	BDP_0368	rpsO SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	lemA LemA protein.	0.424
rpsO	pnp	BDP_0366	BDP_0367	rpsO SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	Pnp Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.867