STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoRPhosphate regulon sensor protein phoR. (456 aa)    
Predicted Functional Partners:
vicR
Response regulator protein VicR.
 0.998
BDP_0519
Pho-related sensory transduction protein kinase.
 
0.938
BDP_0775
Two-component response regulator.
 
 0.910
BDP_0892
Response regulator of two-component system.
 
 0.907
BDP_1973
Response regulator-like transcriptional regulatory protein.
 
 
 0.863
pstS
pstS Phosphate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
     
 0.648
BDP_0500
Histidine kinase sensor of two component system.
  
 
 0.582
BDP_0174
ABC-type sugar transporter, sugar-binding component.
    
 
 0.564
BDP_1483
ABC-type sugar transport system, periplasmic component.
    
 
 0.564
rbsB1
D-ribose-binding protein RbsB.
    
 
 0.564
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.