rpsI protein (Bifidobacterium dentium) - STRING interaction network

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Score

rpsI

rpsI 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (163 aa)

Predicted Functional Partners:

rpsP

0.999

rplM

0.999

rpsJ

0.999

rpmA

0.998

rpsO

0.998

rpsE

0.998

rpsL

0.998

rpsG

0.998

rpsB

0.998

rpsF

0.998

Your Current Organism:

Bifidobacterium dentium

NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rpmA	BDP_0419	BDP_0346	rplM 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	rpmA LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	0.997
rplM	rpsB	BDP_0419	BDP_1202	rplM 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	rpsB SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.994
rplM	rpsE	BDP_0419	BDP_0448	rplM 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	rpsE 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.993
rplM	rpsF	BDP_0419	BDP_2022	rplM 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.989
rplM	rpsG	BDP_0419	BDP_0732	rplM 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	rpsG SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.992
rplM	rpsI	BDP_0419	BDP_0420	rplM 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	rpsI 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsJ	BDP_0419	BDP_0429	rplM 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	rpsJ 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.994
rplM	rpsL	BDP_0419	BDP_0731	rplM 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	rpsL SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.992
rplM	rpsO	BDP_0419	BDP_0366	rplM 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	rpsO SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.992
rplM	rpsP	BDP_0419	BDP_0312	rplM 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	rpsP SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.990
rpmA	rplM	BDP_0346	BDP_0419	rpmA LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	rplM 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rpmA	rpsB	BDP_0346	BDP_1202	rpmA LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	rpsB SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.994
rpmA	rpsE	BDP_0346	BDP_0448	rpmA LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	rpsE 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.983
rpmA	rpsF	BDP_0346	BDP_2022	rpmA LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.992
rpmA	rpsG	BDP_0346	BDP_0732	rpmA LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	rpsG SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.994
rpmA	rpsI	BDP_0346	BDP_0420	rpmA LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	rpsI 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.998
rpmA	rpsJ	BDP_0346	BDP_0429	rpmA LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	rpsJ 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.996
rpmA	rpsL	BDP_0346	BDP_0731	rpmA LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	rpsL SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.993
rpmA	rpsO	BDP_0346	BDP_0366	rpmA LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	rpsO SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.993
rpmA	rpsP	BDP_0346	BDP_0312	rpmA LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	rpsP SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.994