Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BDP_0107 | accC | BDP_0107 | BDP_0360 | Biotin-dependent acyl-CoA carboxylase. | accC Acetyl-/propionyl-CoA carboxylase alpha chain. | 0.911 |
| BDP_0107 | adh2 | BDP_0107 | BDP_0426 | Biotin-dependent acyl-CoA carboxylase. | Adh2 Aldehyde-alcohol dehydrogenase 2; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.923 |
| BDP_0107 | leuA | BDP_0107 | BDP_0235 | Biotin-dependent acyl-CoA carboxylase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.950 |
| BDP_0107 | pfl | BDP_0107 | BDP_1376 | Biotin-dependent acyl-CoA carboxylase. | Pfl Formate acetyltransferase. | 0.900 |
| BDP_0107 | pta | BDP_0107 | BDP_1007 | Biotin-dependent acyl-CoA carboxylase. | Phosphate acetyltransferase. | 0.908 |
| BDP_0107 | sucC | BDP_0107 | BDP_1172 | Biotin-dependent acyl-CoA carboxylase. | Succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.836 |
| BDP_0107 | sucD | BDP_0107 | BDP_1171 | Biotin-dependent acyl-CoA carboxylase. | Succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.820 |
| BDP_1078 | adh2 | BDP_1078 | BDP_0426 | Glutamate synthase [NADPH] large subunit. | Adh2 Aldehyde-alcohol dehydrogenase 2; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.792 |
| BDP_1078 | leuA | BDP_1078 | BDP_0235 | Glutamate synthase [NADPH] large subunit. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.500 |
| BDP_1078 | sucC | BDP_1078 | BDP_1172 | Glutamate synthase [NADPH] large subunit. | Succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.710 |
| BDP_1078 | sucD | BDP_1078 | BDP_1171 | Glutamate synthase [NADPH] large subunit. | Succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.735 |
| accC | BDP_0107 | BDP_0360 | BDP_0107 | accC Acetyl-/propionyl-CoA carboxylase alpha chain. | Biotin-dependent acyl-CoA carboxylase. | 0.911 |
| accC | adh2 | BDP_0360 | BDP_0426 | accC Acetyl-/propionyl-CoA carboxylase alpha chain. | Adh2 Aldehyde-alcohol dehydrogenase 2; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.923 |
| accC | leuA | BDP_0360 | BDP_0235 | accC Acetyl-/propionyl-CoA carboxylase alpha chain. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.950 |
| accC | pfl | BDP_0360 | BDP_1376 | accC Acetyl-/propionyl-CoA carboxylase alpha chain. | Pfl Formate acetyltransferase. | 0.900 |
| accC | pta | BDP_0360 | BDP_1007 | accC Acetyl-/propionyl-CoA carboxylase alpha chain. | Phosphate acetyltransferase. | 0.908 |
| accC | sucC | BDP_0360 | BDP_1172 | accC Acetyl-/propionyl-CoA carboxylase alpha chain. | Succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.836 |
| accC | sucD | BDP_0360 | BDP_1171 | accC Acetyl-/propionyl-CoA carboxylase alpha chain. | Succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.820 |
| adh | adh2 | BDP_1109 | BDP_0426 | Alcohol dehydrogenase. | Adh2 Aldehyde-alcohol dehydrogenase 2; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.944 |
| adh | adh3-2 | BDP_1109 | BDP_1355 | Alcohol dehydrogenase. | Adh3 Alcohol dehydrogenase. | 0.970 |
page 1 of 4