Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDP_0050 | BDP_0474 | BDP_0050 | BDP_0474 | Aminotransferase. | Putative S-adenosylhomocysteine hydrolase. | 0.900 |
BDP_0050 | BDP_0671 | BDP_0050 | BDP_0671 | Aminotransferase. | Cystathionine gamma-synthase. | 0.928 |
BDP_0050 | BDP_1111 | BDP_0050 | BDP_1111 | Aminotransferase. | Methionine synthase vitamin-B12 independent protein. | 0.903 |
BDP_0050 | cysK | BDP_0050 | BDP_0670 | Aminotransferase. | cysK cysteine synthase. | 0.927 |
BDP_0050 | metB-2 | BDP_0050 | BDP_0672 | Aminotransferase. | metB Cystathionine gamma-synthase. | 0.934 |
BDP_0050 | metC1 | BDP_0050 | BDP_0697 | Aminotransferase. | metC1 Cystathionine beta-lyase. | 0.931 |
BDP_0050 | metE | BDP_0050 | BDP_1085 | Aminotransferase. | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.903 |
BDP_0050 | metY | BDP_0050 | BDP_0560 | Aminotransferase. | metY O-acetylhomoserine aminocarboxypropyltransferase. | 0.913 |
BDP_0050 | metY-2 | BDP_0050 | BDP_0810 | Aminotransferase. | MetY O-acetylhomoserine aminocarboxypropyltransferase. | 0.912 |
BDP_0474 | BDP_0050 | BDP_0474 | BDP_0050 | Putative S-adenosylhomocysteine hydrolase. | Aminotransferase. | 0.900 |
BDP_0474 | BDP_0671 | BDP_0474 | BDP_0671 | Putative S-adenosylhomocysteine hydrolase. | Cystathionine gamma-synthase. | 0.930 |
BDP_0474 | BDP_1111 | BDP_0474 | BDP_1111 | Putative S-adenosylhomocysteine hydrolase. | Methionine synthase vitamin-B12 independent protein. | 0.949 |
BDP_0474 | cysK | BDP_0474 | BDP_0670 | Putative S-adenosylhomocysteine hydrolase. | cysK cysteine synthase. | 0.949 |
BDP_0474 | metB-2 | BDP_0474 | BDP_0672 | Putative S-adenosylhomocysteine hydrolase. | metB Cystathionine gamma-synthase. | 0.930 |
BDP_0474 | metC1 | BDP_0474 | BDP_0697 | Putative S-adenosylhomocysteine hydrolase. | metC1 Cystathionine beta-lyase. | 0.920 |
BDP_0474 | metE | BDP_0474 | BDP_1085 | Putative S-adenosylhomocysteine hydrolase. | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.949 |
BDP_0474 | metY | BDP_0474 | BDP_0560 | Putative S-adenosylhomocysteine hydrolase. | metY O-acetylhomoserine aminocarboxypropyltransferase. | 0.907 |
BDP_0474 | metY-2 | BDP_0474 | BDP_0810 | Putative S-adenosylhomocysteine hydrolase. | MetY O-acetylhomoserine aminocarboxypropyltransferase. | 0.907 |
BDP_0671 | BDP_0050 | BDP_0671 | BDP_0050 | Cystathionine gamma-synthase. | Aminotransferase. | 0.928 |
BDP_0671 | BDP_0474 | BDP_0671 | BDP_0474 | Cystathionine gamma-synthase. | Putative S-adenosylhomocysteine hydrolase. | 0.930 |
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