Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BDP_0565Solute-binding protein of ABC transporter system(lactose). (426 aa)    
Predicted Functional Partners:
BDP_0566
Permease protein of ABC transporter system for sugars.
 
 0.992
BDP_0567
Sugar-binding protein of ABC transporter system, permease.
 
 
 0.917
BDP_2165
Binding-protein-dependent transport systems inner membrane component.
 
   0.706
BDP_1911
Solute-binding protein of ABC transporter system for sugars.
  
   
 0.692
BDP_0653
Solute-binding protein of ABC transporter system for sugars.
  
   
 0.641
BDP_2159
Permease protein of ABC transporter system for sugars.
 
 
 0.632
BDP_2164
Sugar ABC transporter, permease protein.
 
 
 0.631
BDP_2160
Sugar-binding protein of ABC transporter system.
 
   0.614
BDP_0568
Beta-1,4-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
    0.611
BDP_2131
Transcriptional regulator, LacI family.
 
     0.586
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.