STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livFBranched-chain amino acid transport ATP-binding protein livF. (234 aa)    
Predicted Functional Partners:
BDP_0607
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
BDP_0606
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
BDP_0605
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein.
 
 
 0.994
livG
Branched-chain amino acid transport ATP-binding protein livG.
 
 
0.990
BDP_0099
Branched-chain amino acid transport system ATPase component.
  
  
 
0.905
BDP_0097
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.834
BDP_0544
ATP-binding protein of ABC transporter system.
 
     
0.789
BDP_0096
Branched-chain amino acid ABC transport system permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.788
BDP_0610
Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.
       0.663
rfe
Rfe Undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase.
       0.663
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.