Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BDP_0474 | BDP_1111 | BDP_0474 | BDP_1111 | Putative S-adenosylhomocysteine hydrolase. | Methionine synthase vitamin-B12 independent protein. | 0.949 |
| BDP_0474 | dcm | BDP_0474 | BDP_1479 | Putative S-adenosylhomocysteine hydrolase. | Dcm Cytosine methyl transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.905 |
| BDP_0474 | metE | BDP_0474 | BDP_1085 | Putative S-adenosylhomocysteine hydrolase. | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.949 |
| BDP_0474 | metK | BDP_0474 | BDP_0746 | Putative S-adenosylhomocysteine hydrolase. | metK S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.718 |
| BDP_0696 | BDP_1111 | BDP_0696 | BDP_1111 | Aminotransferase. | Methionine synthase vitamin-B12 independent protein. | 0.906 |
| BDP_0696 | metB | BDP_0696 | BDP_0406 | Aminotransferase. | metB Cystathionine gamma-synthase. | 0.913 |
| BDP_0696 | metE | BDP_0696 | BDP_1085 | Aminotransferase. | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.906 |
| BDP_0696 | metK | BDP_0696 | BDP_0746 | Aminotransferase. | metK S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.921 |
| BDP_1111 | BDP_0474 | BDP_1111 | BDP_0474 | Methionine synthase vitamin-B12 independent protein. | Putative S-adenosylhomocysteine hydrolase. | 0.949 |
| BDP_1111 | BDP_0696 | BDP_1111 | BDP_0696 | Methionine synthase vitamin-B12 independent protein. | Aminotransferase. | 0.906 |
| BDP_1111 | fadh2 | BDP_1111 | BDP_1086 | Methionine synthase vitamin-B12 independent protein. | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.784 |
| BDP_1111 | metB | BDP_1111 | BDP_0406 | Methionine synthase vitamin-B12 independent protein. | metB Cystathionine gamma-synthase. | 0.937 |
| BDP_1111 | metE | BDP_1111 | BDP_1085 | Methionine synthase vitamin-B12 independent protein. | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.900 |
| BDP_1111 | metK | BDP_1111 | BDP_0746 | Methionine synthase vitamin-B12 independent protein. | metK S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.962 |
| dcm | BDP_0474 | BDP_1479 | BDP_0474 | Dcm Cytosine methyl transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Putative S-adenosylhomocysteine hydrolase. | 0.905 |
| dcm | metK | BDP_1479 | BDP_0746 | Dcm Cytosine methyl transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | metK S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.914 |
| fadh2 | BDP_1111 | BDP_1086 | BDP_1111 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Methionine synthase vitamin-B12 independent protein. | 0.784 |
| fadh2 | metB | BDP_1086 | BDP_0406 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | metB Cystathionine gamma-synthase. | 0.554 |
| fadh2 | metE | BDP_1086 | BDP_1085 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.956 |
| fadh2 | metK | BDP_1086 | BDP_0746 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | metK S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.674 |
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