STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_0766Von Willebrand factor, type A. (355 aa)    
Predicted Functional Partners:
BDP_0765
Von Willebrand factor, type A.
 
     0.965
BDP_0768
Conserved hypothetical protein.
 
   
 0.963
morX2
moxR2 MoxR protein.
 
   
 0.888
ebpS
Cell surface elastin binding protein EbpS.
       0.856
BDP_0767
Conserved hypothetical protein.
       0.856
BDP_0761
Esterase/lipase.
 
     0.668
BDP_0771
Conserved hypothetical protein.
 
     0.606
BDP_0398
DNA and RNA helicase related protein.
  
     0.598
BDP_1938
Conserved hypothetical protein.
  
     0.595
ung
Ung Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.555
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.