STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_0768Conserved hypothetical protein. (317 aa)    
Predicted Functional Partners:
BDP_0765
Von Willebrand factor, type A.
 
   
 0.954
BDP_0766
Von Willebrand factor, type A.
 
   
 0.953
morX2
moxR2 MoxR protein.
 
  
 0.940
ebpS
Cell surface elastin binding protein EbpS.
       0.822
BDP_0767
Conserved hypothetical protein.
       0.822
BDP_1774
ATPase.
 
  
 0.743
BDP_1331
Narrowly conserved hypothetical protein.
 
  
 0.540
BDP_0761
Esterase/lipase.
 
     0.534
BDP_0169
Putative lipoprotein.
  
     0.516
ung
Ung Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.514
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.