STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BDP_0773Conserved hypothetical protein; Belongs to the WXG100 family. (65 aa)    
Predicted Functional Partners:
glnD-2
glnD [protein-PII] uridylyltransferase; Belongs to the WXG100 family.
  
 
 0.924
BDP_0881
DNA segregation ATPase-like protein.
 
 
 0.741
BDP_0761
Esterase/lipase.
  
     0.724
BDP_0398
DNA and RNA helicase related protein.
  
     0.701
BDP_1565
DNA segregation ATPase and related proteins (FtsK/SpoIIIE family).
  
 
 0.701
BDP_1937
Conserved hypothetical protein.
  
     0.679
BDP_0774
Conserved hypothetical protein.
  
  
 0.661
BDP_0776
Two component system histidine kinase.
 
   
 0.629
BDP_0476
Narrowly conserved hypothetical secreted protein.
  
     0.621
BDP_1625
Aminoglycoside phosphotransferase.
  
     0.605
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.