cspB protein (Bifidobacterium dentium) - STRING interaction network

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[Homology]

Score

cspB

cspB Cold shock protein. (70 aa)

Predicted Functional Partners:

BDP_0778

0.847

BDP_0839

0.770

pepP

0.758

rlpW

0.756

groEL

0.722

clpC

0.718

BDP_1590

0.706

rplC

0.704

rplV

0.702

rplT

0.699

Your Current Organism:

Bifidobacterium dentium

NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP_0778	cspB	BDP_0778	BDP_0777	Conserved hypothetical protein.	cspB Cold shock protein.	0.847
BDP_0839	cspB	BDP_0839	BDP_0777	ATP-dependent RNA helicase.	cspB Cold shock protein.	0.770
BDP_0839	rlpW	BDP_0839	BDP_0432	ATP-dependent RNA helicase.	rplW 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.757
BDP_0839	rplC	BDP_0839	BDP_0430	ATP-dependent RNA helicase.	rplC 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.854
BDP_0839	rplT	BDP_0839	BDP_1509	ATP-dependent RNA helicase.	rplT LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.466
BDP_0839	rplV	BDP_0839	BDP_0436	ATP-dependent RNA helicase.	rplV 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.735
BDP_1590	cspB	BDP_1590	BDP_0777	Hemolysin-like protein.	cspB Cold shock protein.	0.706
clpC	cspB	BDP_0780	BDP_0777	clpC Negative regulator of genetic competence clpC/mecB; Belongs to the ClpA/ClpB family.	cspB Cold shock protein.	0.718
clpC	groEL	BDP_0780	BDP_0772	clpC Negative regulator of genetic competence clpC/mecB; Belongs to the ClpA/ClpB family.	groEL 60 kDa chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.	0.834
cspB	BDP_0778	BDP_0777	BDP_0778	cspB Cold shock protein.	Conserved hypothetical protein.	0.847
cspB	BDP_0839	BDP_0777	BDP_0839	cspB Cold shock protein.	ATP-dependent RNA helicase.	0.770
cspB	BDP_1590	BDP_0777	BDP_1590	cspB Cold shock protein.	Hemolysin-like protein.	0.706
cspB	clpC	BDP_0777	BDP_0780	cspB Cold shock protein.	clpC Negative regulator of genetic competence clpC/mecB; Belongs to the ClpA/ClpB family.	0.718
cspB	groEL	BDP_0777	BDP_0772	cspB Cold shock protein.	groEL 60 kDa chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.	0.722
cspB	pepP	BDP_0777	BDP_1527	cspB Cold shock protein.	pepP Xaa-Pro aminopeptidase.	0.758
cspB	rlpW	BDP_0777	BDP_0432	cspB Cold shock protein.	rplW 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.756
cspB	rplC	BDP_0777	BDP_0430	cspB Cold shock protein.	rplC 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.704
cspB	rplT	BDP_0777	BDP_1509	cspB Cold shock protein.	rplT LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.699
cspB	rplV	BDP_0777	BDP_0436	cspB Cold shock protein.	rplV 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.702
groEL	clpC	BDP_0772	BDP_0780	groEL 60 kDa chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.	clpC Negative regulator of genetic competence clpC/mecB; Belongs to the ClpA/ClpB family.	0.834